Commits · master · IGR-lab / sea_regulatory_variation

Aug 31, 2020
- Changed file name · 5e823933
  Katalina Bobowik authored 4 years ago
  5e823933
Aug 04, 2020
- New script on number of genes without TSL levels · 76905c20
  Katalina Bobowik authored 4 years ago
  76905c20
Jun 09, 2020
- Adding untracked files · 44f9bcd2
  Katalina Bobowik authored 4 years ago
  
  44f9bcd2
May 14, 2019
- adding new gene set analysis for island · 272a40d7
  Katalina Bobowik authored 5 years ago
  
  272a40d7
May 08, 2019
- add upsetR plots and add more results for village analyses · a5b62643
  Katalina Bobowik authored 5 years ago
  
  a5b62643
May 02, 2019
- add in Revigo plots · 038c1aa8
  Katalina Bobowik authored 6 years ago
  
  038c1aa8
Apr 30, 2019
- change how to get genes in count file · 38d444fc
  Katalina Bobowik authored 6 years ago
  
  38d444fc
Apr 26, 2019
- Delete thesis writing folder · c21bd7f4
  Katalina Bobowik authored 6 years ago
  
  c21bd7f4
- New thesis folder · 639362ec
  Katalina Bobowik authored 6 years ago
  
  639362ec
Apr 17, 2019
- delete REVIGO plots and update RUVs setup · fc1c56f1
  Katalina Bobowik authored 6 years ago
  
  fc1c56f1
Apr 15, 2019
- update paths · 886cbf44
  Katalina Bobowik authored 6 years ago
  
  886cbf44
Apr 10, 2019
- added blocking to DE analysis · 6db6c661
  Katalina Bobowik authored 6 years ago
  
  6db6c661
Apr 05, 2019
- updated paths · 3f127d61
  Katalina Bobowik authored 6 years ago
  
  3f127d61
Apr 04, 2019
- dropped source loading and got rid of hard coding · 83f0ecc0
  Katalina Bobowik authored 6 years ago
  
  83f0ecc0
Apr 03, 2019
- Merge pull request #1 from ireneg/master · 07d8d1a2
  Katalina Bobowik authored 6 years ago
  07d8d1a2
- Final set of updates from IGR - paths are mostly cleaned, except for the final... · b98ff187
  Irene Gallego Romero authored 6 years ago
  b98ff187
- Fixed paths in second script, minor notes and cosmetic edits. · b815719f
  Irene Gallego Romero authored 6 years ago
  
  b815719f
- IGR edit read ins, clean package loading list and get rid of hardcoding of paths and indexes · dadf09e8
  Irene Gallego Romero authored 6 years ago
  
  dadf09e8
- New blood deconvolution and STAR mapping files · 61e4702b
  Katalina Bobowik authored 6 years ago
  
  61e4702b
Feb 12, 2019
- add in new Revigo plots · 11e46816
  Katalina Bobowik authored 6 years ago
  
  11e46816
Jan 11, 2019
- tidying up scripts and deleting scripts I don't need · dcf45458
  Katalina Bobowik authored 6 years ago
  
  dcf45458
Jan 10, 2019
- new scripts (variance partition) and editing DE pipeline · 127d1c5e
  Katalina Bobowik authored 6 years ago
  
  127d1c5e
Dec 28, 2018
- put in correct GTF file name, update DE code · 0835544b
  Katalina Bobowik authored 6 years ago
  
  0835544b
Dec 12, 2018
- updated scripts · 10569ecd
  Katalina Bobowik authored 6 years ago
  
  10569ecd